CRAN.R-project.org/package=ClustAssess
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ClustAssess: Tools for Assessing Clustering
A set of tools for evaluating clustering robustness using proportion of ambiguously clustered pairs (Senbabaoglu et al. (2014) <<a href="https://doi.org/10.1038%2Fsrep06207" target="_top">doi:10.1038/srep06207</a>>), as well as similarity across methods and method stability using element-centric clustering comparison (Gates et al. (2019) <<a href="https://doi.org/10.1038%2Fs41598-019-44892-y" target="_top">doi:10.1038/s41598-019-44892-y</a>>). Additionally, this package enables stability-based parameter assessment for graph-based clustering pipelines typical in single-cell data analysis.
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ClustAssess: Tools for Assessing Clustering
A set of tools for evaluating clustering robustness using proportion of ambiguously clustered pairs (Senbabaoglu et al. (2014) <<a href="https://doi.org/10.1038%2Fsrep06207" target="_top">doi:10.1038/srep06207</a>>), as well as similarity across methods and method stability using element-centric clustering comparison (Gates et al. (2019) <<a href="https://doi.org/10.1038%2Fs41598-019-44892-y" target="_top">doi:10.1038/s41598-019-44892-y</a>>). Additionally, this package enables stability-based parameter assessment for graph-based clustering pipelines typical in single-cell data analysis.
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ClustAssess: Tools for Assessing Clustering
A set of tools for evaluating clustering robustness using proportion of ambiguously clustered pairs (Senbabaoglu et al. (2014) <<a href="https://doi.org/10.1038%2Fsrep06207" target="_top">doi:10.1038/srep06207</a>>), as well as similarity across methods and method stability using element-centric clustering comparison (Gates et al. (2019) <<a href="https://doi.org/10.1038%2Fs41598-019-44892-y" target="_top">doi:10.1038/s41598-019-44892-y</a>>). Additionally, this package enables stability-based parameter assessment for graph-based clustering pipelines typical in single-cell data analysis.
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12- titleCRAN: Package ClustAssess
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- citation_titleTools for Assessing Clustering [R package ClustAssess version 1.0.0]
- citation_author1Andi Munteanu
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5- og:titleClustAssess: Tools for Assessing Clustering
- og:descriptionA set of tools for evaluating clustering robustness using proportion of ambiguously clustered pairs (Senbabaoglu et al. (2014) <<a href="https://doi.org/10.1038%2Fsrep06207" target="_top">doi:10.1038/srep06207</a>>), as well as similarity across methods and method stability using element-centric clustering comparison (Gates et al. (2019) <<a href="https://doi.org/10.1038%2Fs41598-019-44892-y" target="_top">doi:10.1038/s41598-019-44892-y</a>>). Additionally, this package enables stability-based parameter assessment for graph-based clustering pipelines typical in single-cell data analysis.
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13- https://CRAN.R-project.org/package=ClustAssess
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- https://blaserlab.r-universe.dev
- https://core-bioinformatics.github.io/ClustAssess
- https://doi.org/10.1038%2Fs41598-019-44892-y